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 - databases for immunodeficiency-causing variations

   STAT3base
   Variation registry for  Hyper-IgE syndrome


Codon changes - STAT3base

  a
a
a		 a
a
c		 a
a
g		 a
a
t		 a
c
a		 a
c
c		 a
c
g		 a
c
t		 a
g
a		 a
g
c		 a
g
g		 a
g
t		 a
t
a		 a
t
c		 a
t
g		 a
t
t		 c
a
a		 c
a
c		 c
a
g		 c
a
t		 c
c
a		 c
c
c		 c
c
g		 c
c
t		 c
g
a		 c
g
c		 c
g
g		 c
g
t		 c
t
a		 c
t
c		 c
t
g		 c
t
t		 g
a
a		 g
a
c		 g
a
g		 g
a
t		 g
c
a		 g
c
c		 g
c
g		 g
c
t		 g
g
a		 g
g
c		 g
g
g		 g
g
t		 g
t
a		 g
t
c		 g
t
g		 g
t
t		 t
a
a		 t
a
c		 t
a
g		 t
a
t		 t
c
a		 t
c
c		 t
c
g		 t
c
t		 t
g
a		 t
g
c		 t
g
g		 t
g
t		 t
t
a		 t
t
c		 t
t
g		 t
t
t		 Total
aaa                                 1                               1
aac                                  3                              3
aag                                                                 0
aat                                                                 0
aca             1                                                   1
acc                                                      1          1
acg                                                                 0
act                2                                                2
aga                                                                 0
agc                                                                 0
agg                                                                 0
agt    1                                                            1
ata                                                                 0
atc                                                                 0
atg                                                                 0
att                                                                 0
caa                                                                 0
cac                      2                           1              3
cag                       1                                         1
cat                                                    3            3
cca                                     1                           1
ccc                                                                 0
ccg                                                                 0
cct                                                                 0
cga                 5                                               5
cgc                                                                 0
cgg                   16           1           2               19     38
cgt                                                                 0
cta                                                                 0
ctc                                                                 0
ctg                                                                 0
ctt                                                                 0
gaa 3                                       1                       4
gac                                                                 0
gag                                                                 0
gat                                                                 0
gca                                                                 0
gcc                                                                 0
gcg                                                                 0
gct                                                                 0
gga                                                                 0
ggc                                  1                              1
ggg                                                                 0
ggt                                                                 0
gta                                                                 0
gtc                                                                 0
gtg               11                                               1 12
gtt                                                                 0
taa                                                                 0
tac                                                                 0
tag                                                                 0
tat                                                            2    2
tca                                                                 0
tcc                                      1                          1
tcg                                                                 0
tct                                                                 0
tga                                                                 0
tgc                                                                 0
tgg                                                                 0
tgt                                                                 0
tta                                                                 0
ttc                                              1                1 2
ttg                                                                 0
ttt                                1                       1        2
Total 300100000000101125016002100000001114001100102001000103010100192002084

-->(%) a
a
a		 a
a
c		 a
a
g		 a
a
t		 a
c
a		 a
c
c		 a
c
g		 a
c
t		 a
g
a		 a
g
c		 a
g
g		 a
g
t		 a
t
a		 a
t
c		 a
t
g		 a
t
t		 c
a
a		 c
a
c		 c
a
g		 c
a
t		 c
c
a		 c
c
c		 c
c
g		 c
c
t		 c
g
a		 c
g
c		 c
g
g		 c
g
t		 c
t
a		 c
t
c		 c
t
g		 c
t
t		 g
a
a		 g
a
c		 g
a
g		 g
a
t		 g
c
a		 g
c
c		 g
c
g		 g
c
t		 g
g
a		 g
g
c		 g
g
g		 g
g
t		 g
t
a		 g
t
c		 g
t
g		 g
t
t		 t
a
a		 t
a
c		 t
a
g		 t
a
t		 t
c
a		 t
c
c		 t
c
g		 t
c
t		 t
g
a		 t
g
c		 t
g
g		 t
g
t		 t
t
a		 t
t
c		 t
t
g		 t
t
t		 Total
aaa                                 1                               1
aac                                  4                              4
aag                                                                 0
aat                                                                 0
aca             1                                                   1
acc                                                      1          1
acg                                                                 0
act                2                                                2
aga                                                                 0
agc                                                                 0
agg                                                                 0
agt    1                                                            1
ata                                                                 0
atc                                                                 0
atg                                                                 0
att                                                                 0
caa                                                                 0
cac                      2                           1              4
cag                       1                                         1
cat                                                    4            4
cca                                     1                           1
ccc                                                                 0
ccg                                                                 0
cct                                                                 0
cga                 6                                               6
cgc                                                                 0
cgg                   19           1           2               23     45
cgt                                                                 0
cta                                                                 0
ctc                                                                 0
ctg                                                                 0
ctt                                                                 0
gaa 4                                       1                       5
gac                                                                 0
gag                                                                 0
gat                                                                 0
gca                                                                 0
gcc                                                                 0
gcg                                                                 0
gct                                                                 0
gga                                                                 0
ggc                                  1                              1
ggg                                                                 0
ggt                                                                 0
gta                                                                 0
gtc                                                                 0
gtg               13                                               1 14
gtt                                                                 0
taa                                                                 0
tac                                                                 0
tag                                                                 0
tat                                                            2    2
tca                                                                 0
tcc                                      1                          1
tcg                                                                 0
tct                                                                 0
tga                                                                 0
tgc                                                                 0
tgg                                                                 0
tgt                                                                 0
tta                                                                 0
ttc                                              1                1 2
ttg                                                                 0
ttt                                1                       1        2
Total 4001000000001013260190021000000011150011001020010001040101002320020100
    indicates codon change that require more complex mutation than single nucleotide substitution.
    indicates codon change that single nucleotide doesn't change amino acid (silent mutation).


This site is updated by Gerard Schaafsma
© Protein Structure and Bioinformatics, Lund University, 2017
Last modified 02.03.2025