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SMARCAL1base
Variation registry for Schimke immuno-osseous dysplasia

Nucleotide substitutions - SMARCAL1base

Purines/Pyrimidines
	Purines		Pyrimidines
-->	A	G	C	T	Total
A	0	3	5	0	8
G	14	0	4	15	33
C	1	1	0	18	20
T	1	3	4	0	8
Total	16	7	13	33	69

Amino/Keto
	Amino		Keto
-->	A	C	G	T	Total
A	0	5	3	0	8
C	1	0	1	18	20
G	14	4	0	15	33
T	1	4	3	0	8
Total	16	13	7	33	69

Weak/Strong
	Weak		Strong
-->	A	T	C	G	Total
A	0	0	5	3	8
T	1	0	4	3	8
C	1	18	0	1	20
G	14	15	4	0	33
Total	16	33	13	7	69

Purines/Pyrimidines (%)
	Purines		Pyrimidines
-->	A	G	C	T	Total
A	0.0	4.3	7.2	0.0	11.6
G	20.3	0.0	5.8	21.7	47.8
C	1.4	1.4	0.0	26.1	29.0
T	1.4	4.3	5.8	0.0	11.6
Total	23.2	10.1	18.8	47.8	100.0

Amino/Keto (%)
	Amino		Keto
-->	A	C	G	T	Total
A	0.0	7.2	4.3	0.0	11.6
C	1.4	0.0	1.4	26.1	29.0
G	20.3	5.8	0.0	21.7	47.8
T	1.4	5.8	4.3	0.0	11.6
Total	23.2	18.8	10.1	47.8	100.0

Weak/Strong (%)
	Weak		Strong
-->	A	T	C	G	Total
A	0.0	0.0	7.2	4.3	11.6
T	1.4	0.0	5.8	4.3	11.6
C	1.4	26.1	0.0	1.4	29.0
G	20.3	21.7	5.8	0.0	47.8
Total	23.2	47.8	18.8	10.1	100.0

Transitions and Transversions
-->	Purine	Pyrimidine
Purine	17	24
Pyrimidine	6	22

Transitions and Transversions (%)
-->	Purine	Pyrimidine
Purine	24.6	34.8
Pyrimidine	8.7	31.9

This site is updated by Gerard Schaafsma
© Protein Structure and Bioinformatics, Lund University, 2017
Last modified 02.03.2025