ID-bases-logo
 - databases for immunodeficiency-causing variations

   SH2D1Abase
   Variation registry for  X-linked lymphoproliferative syndrome (XLP)


Codon changes - SH2D1Abase

  a
a
a		 a
a
c		 a
a
g		 a
a
t		 a
c
a		 a
c
c		 a
c
g		 a
c
t		 a
g
a		 a
g
c		 a
g
g		 a
g
t		 a
t
a		 a
t
c		 a
t
g		 a
t
t		 c
a
a		 c
a
c		 c
a
g		 c
a
t		 c
c
a		 c
c
c		 c
c
g		 c
c
t		 c
g
a		 c
g
c		 c
g
g		 c
g
t		 c
t
a		 c
t
c		 c
t
g		 c
t
t		 g
a
a		 g
a
c		 g
a
g		 g
a
t		 g
c
a		 g
c
c		 g
c
g		 g
c
t		 g
g
a		 g
g
c		 g
g
g		 g
g
t		 g
t
a		 g
t
c		 g
t
g		 g
t
t		 t
a
a		 t
a
c		 t
a
g		 t
a
t		 t
c
a		 t
c
c		 t
c
g		 t
c
t		 t
g
a		 t
g
c		 t
g
g		 t
g
t		 t
t
a		 t
t
c		 t
t
g		 t
t
t		 Total
aaa                                                                 0
aac                                                                 0
aag                                                                 0
aat                                                                 0
aca         1   1                                                   2
acc                                                                 0
acg                                                                 0
act                                                                 0
aga                                                                 0
agc         1 1                              2                      4
agg       1                                                         1
agt                                                                 0
ata                                                                 0
atc                                                                 0
atg                1                                                1
att        6                                                        6
caa                                                                 0
cac                                                                 0
cag                       1                           2             3
cat                        1           1                            2
cca                             1                                   1
ccc                                                                 0
ccg                                                                 0
cct                                                                 0
cga                             1                           22       23
cgc                                                                 0
cgg                                                                 0
cgt                                                                 0
cta                                                                 0
ctc                                                                 0
ctg                       1                                         1
ctt                                                                 0
gaa                                                                 0
gac                                                  1              1
gag                                    3                            4
gat                                                                 0
gca                                                                 0
gcc                                                                 0
gcg                                                                 0
gct                                                                 0
gga                                                                 0
ggc          1                       2                              3
ggg                                                                 0
ggt                                                1                1
gta                                                                 0
gtc                                                                 0
gtg                                                                 0
gtt                                            1                    1
taa                                                                 0
tac                                                          2      2
tag                                                                 0
tat                                                 4          1    5
tca                                                                 0
tcc                                                                 0
tcg                                                                 0
tct                                                                 0
tga         1                                                       1
tgc                                                           1     1
tgg                                                   2             2
tgt                                                                 0
tta                                                                 0
ttc                                                                 0
ttg                                                                 0
ttt                                                        3        3
Total 0000001631101001000000210000200012040000020100014140000322211000068

-->(%) a
a
a		 a
a
c		 a
a
g		 a
a
t		 a
c
a		 a
c
c		 a
c
g		 a
c
t		 a
g
a		 a
g
c		 a
g
g		 a
g
t		 a
t
a		 a
t
c		 a
t
g		 a
t
t		 c
a
a		 c
a
c		 c
a
g		 c
a
t		 c
c
a		 c
c
c		 c
c
g		 c
c
t		 c
g
a		 c
g
c		 c
g
g		 c
g
t		 c
t
a		 c
t
c		 c
t
g		 c
t
t		 g
a
a		 g
a
c		 g
a
g		 g
a
t		 g
c
a		 g
c
c		 g
c
g		 g
c
t		 g
g
a		 g
g
c		 g
g
g		 g
g
t		 g
t
a		 g
t
c		 g
t
g		 g
t
t		 t
a
a		 t
a
c		 t
a
g		 t
a
t		 t
c
a		 t
c
c		 t
c
g		 t
c
t		 t
g
a		 t
g
c		 t
g
g		 t
g
t		 t
t
a		 t
t
c		 t
t
g		 t
t
t		 Total
aaa                                                                 0
aac                                                                 0
aag                                                                 0
aat                                                                 0
aca         1   1                                                   3
acc                                                                 0
acg                                                                 0
act                                                                 0
aga                                                                 0
agc         1 1                              3                      6
agg       1                                                         1
agt                                                                 0
ata                                                                 0
atc                                                                 0
atg                1                                                1
att        9                                                        9
caa                                                                 0
cac                                                                 0
cag                       1                           3             4
cat                        1           1                            3
cca                             1                                   1
ccc                                                                 0
ccg                                                                 0
cct                                                                 0
cga                             1                           32       34
cgc                                                                 0
cgg                                                                 0
cgt                                                                 0
cta                                                                 0
ctc                                                                 0
ctg                       1                                         1
ctt                                                                 0
gaa                                                                 0
gac                                                  1              1
gag                                    4                            6
gat                                                                 0
gca                                                                 0
gcc                                                                 0
gcg                                                                 0
gct                                                                 0
gga                                                                 0
ggc          1                       3                              4
ggg                                                                 0
ggt                                                1                1
gta                                                                 0
gtc                                                                 0
gtg                                                                 0
gtt                                            1                    1
taa                                                                 0
tac                                                          3      3
tag                                                                 0
tat                                                 6          1    7
tca                                                                 0
tcc                                                                 0
tcg                                                                 0
tct                                                                 0
tga         1                                                       1
tgc                                                           1     1
tgg                                                   3             3
tgt                                                                 0
tta                                                                 0
ttc                                                                 0
ttg                                                                 0
ttt                                                        4        4
Total 00000019411010010000003100003000130600000301000161600004323110000100
    indicates codon change that require more complex mutation than single nucleotide substitution.
    indicates codon change that single nucleotide doesn't change amino acid (silent mutation).


This site is updated by Gerard Schaafsma
© Protein Structure and Bioinformatics, Lund University, 2017
Last modified 02.03.2025