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 - databases for immunodeficiency-causing variations

   SERPING1base
   Variation registry for  Hereditary angioedema


Codon changes - SERPING1base

  a
a
a		 a
a
c		 a
a
g		 a
a
t		 a
c
a		 a
c
c		 a
c
g		 a
c
t		 a
g
a		 a
g
c		 a
g
g		 a
g
t		 a
t
a		 a
t
c		 a
t
g		 a
t
t		 c
a
a		 c
a
c		 c
a
g		 c
a
t		 c
c
a		 c
c
c		 c
c
g		 c
c
t		 c
g
a		 c
g
c		 c
g
g		 c
g
t		 c
t
a		 c
t
c		 c
t
g		 c
t
t		 g
a
a		 g
a
c		 g
a
g		 g
a
t		 g
c
a		 g
c
c		 g
c
g		 g
c
t		 g
g
a		 g
g
c		 g
g
g		 g
g
t		 g
t
a		 g
t
c		 g
t
g		 g
t
t		 t
a
a		 t
a
c		 t
a
g		 t
a
t		 t
c
a		 t
c
c		 t
c
g		 t
c
t		 t
g
a		 t
g
c		 t
g
g		 t
g
t		 t
t
a		 t
t
c		 t
t
g		 t
t
t		 Total
aaa                                                                 0
aac                                                                 0
aag                                                                 0
aat                                                                 0
aca                                                                 0
acc                      5                                          5
acg                                                                 0
act                        2                                        2
aga                                                                 0
agc                                                                 0
agg                                                                 0
agt                                                                 0
ata                                                                 0
atc      1   5                                   1                  7
atg   2   3                                       4                 9
att                                                                 0
caa                                                                 0
cac                          2                                      2
cag                                   1               12             13
cat                                                                 0
cca                             2                                   2
ccc                          3   1                       1          5
ccg                                                                 0
cct                            1                                    1
cga                                                         9       9
cgc          1       10   1       4                           15      31
cgg                                                                 0
cgt                                                                 0
cta                                                                 1
ctc                      1   1                                      2
ctg                       1   1                                     3
ctt                                                                 0
gaa                                                                 0
gac                                                                 0
gag                                                   1             1
gat                                                1                1
gca     3                                                           3
gcc                                                                 0
gcg                                   2                             2
gct                                                                 0
gga                                                                 0
ggc                                                                 0
ggg           25               1       4                             30
ggt                                                                 0
gta                                                                 0
gtc                                  4                              5
gtg               1                   2       1                     4
gtt                                                                 0
taa                                                                 0
tac  1                                                3             4
tag                                                                 0
tat                                                 2               2
tca                                                 1       2       3
tcc                      2                                          2
tcg                                                                 0
tct                                                                 0
tga                                                                 0
tgc                                                  2              2
tgg                                                   3     2       5
tgt                                                    3            3
tta                                                                 0
ttc                              1                       2          7
ttg                                                                 0
ttt                                                        3   1    4
Total 012031300625000100100009120621260014900000001001418219303031415010000170

-->(%) a
a
a		 a
a
c		 a
a
g		 a
a
t		 a
c
a		 a
c
c		 a
c
g		 a
c
t		 a
g
a		 a
g
c		 a
g
g		 a
g
t		 a
t
a		 a
t
c		 a
t
g		 a
t
t		 c
a
a		 c
a
c		 c
a
g		 c
a
t		 c
c
a		 c
c
c		 c
c
g		 c
c
t		 c
g
a		 c
g
c		 c
g
g		 c
g
t		 c
t
a		 c
t
c		 c
t
g		 c
t
t		 g
a
a		 g
a
c		 g
a
g		 g
a
t		 g
c
a		 g
c
c		 g
c
g		 g
c
t		 g
g
a		 g
g
c		 g
g
g		 g
g
t		 g
t
a		 g
t
c		 g
t
g		 g
t
t		 t
a
a		 t
a
c		 t
a
g		 t
a
t		 t
c
a		 t
c
c		 t
c
g		 t
c
t		 t
g
a		 t
g
c		 t
g
g		 t
g
t		 t
t
a		 t
t
c		 t
t
g		 t
t
t		 Total
aaa                                                                 0
aac                                                                 0
aag                                                                 0
aat                                                                 0
aca                                                                 0
acc                      3                                          3
acg                                                                 0
act                        1                                        1
aga                                                                 0
agc                                                                 0
agg                                                                 0
agt                                                                 0
ata                                                                 0
atc      1   3                                   1                  4
atg   1   2                                       2                 5
att                                                                 0
caa                                                                 0
cac                          1                                      1
cag                                   1               7             8
cat                                                                 0
cca                             1                                   1
ccc                          2   1                       1          3
ccg                                                                 0
cct                            1                                    1
cga                                                         5       5
cgc          1       6   1       2                           9      18
cgg                                                                 0
cgt                                                                 0
cta                                                                 1
ctc                      1   1                                      1
ctg                       1   1                                     2
ctt                                                                 0
gaa                                                                 0
gac                                                                 0
gag                                                   1             1
gat                                                1                1
gca     2                                                           2
gcc                                                                 0
gcg                                   1                             1
gct                                                                 0
gga                                                                 0
ggc                                                                 0
ggg           15               1       2                             18
ggt                                                                 0
gta                                                                 0
gtc                                  2                              3
gtg               1                   1       1                     2
gtt                                                                 0
taa                                                                 0
tac  1                                                2             2
tag                                                                 0
tat                                                 1               1
tca                                                 1       1       2
tcc                      1                                          1
tcg                                                                 0
tct                                                                 0
tga                                                                 0
tgc                                                  1              1
tgg                                                   2     1       3
tgt                                                    2            2
tta                                                                 0
ttc                              1                       1          4
ttg                                                                 0
ttt                                                        2   1    2
Total 011021200415000100600051104111400125000000010012151112020289010000100
    indicates codon change that require more complex mutation than single nucleotide substitution.
    indicates codon change that single nucleotide doesn't change amino acid (silent mutation).


This site is updated by Gerard Schaafsma
© Protein Structure and Bioinformatics, Lund University, 2017
Last modified 02.03.2025