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- databases for immunodeficiency-causing variations

   ITGB2base
   Variation registry for  Leukocyte adhesion deficiency I (LAD-I)


Codon changes - ITGB2base

 - indicates codon change that require more complex mutation than single nucleotide substitution.
--> aaa aac aag aat aca acc acg act aga agc agg agt ata atc atg att caa cac cag cat cca ccc ccg cct cga cgc cgg cgt cta ctc ctg ctt gaa gac gag gat gca gcc gcg gct gga ggc ggg ggt gta gtc gtg gtt taa tac tag tat tca tcc tcg tct tga tgc tgg tgt tta ttc ttg ttt Total
aaa -1------------------------------------------------------1
aac -------------------------------------------------------0
aag -------------------------------------------------------0
aat -------2------------------------------------------------2
aca -------------------------------------------------------0
acc -------------------------------------------------------0
acg -------------------------------------------------------0
act -------------------------------------------------------0
aga -------------------------------------------------------0
agc -------------------------------------------------------0
agg -------------------------------------------------------0
agt -------------------------------------------------------0
ata -------------------------------------------------------0
atc -------------------------------------------------------0
atg --1-----------------------------------------------------1
att -------------------------------------------------------0
caa -------------------------------------------------------0
cac -------------------------------------------------------0
cag ------------------------------------------2-------------2
cat -------------------------------------------------------0
cca -------------------------------------------------------0
ccc -------------------------------------------------------0
ccg ------------------------2-------------------------------2
cct -------------------------------------------------------0
cga -------------------------------------------------------0
cgc -------------------------------------------------------0
cgg --------------------------------------------------4-----4
cgt ---------------------------------------------------5----5
cta ------------------1-------------------------------------1
ctc -------------------------------------------------------0
ctg -------------------------------------------------------0
ctt -------------------------------------------------------0
gaa -------------------------------------------------------0
gac -2------------------------------------------------------2
gag ------------------------------------------1-------------1
gat ------------------1-------------------------------------1
gca -------------------------------------------------------0
gcc --------------------1-----------------------------------1
gcg ---------------------------------------1----------------1
gct -------------------------------------------------------0
gga --------1-----------------------------------------------1
ggc ---------9----------------------------------------------9
ggg ----------4---------------------------------------------4
ggt -------------------------------------------------------0
gta -------------------------------------------------------0
gtc -------------------------------------------------------0
gtg -------------------------------------------------------0
gtt -------------------------------------------------------0
taa -------------------------------------------------------0
tac -------------------------------------------------------0
tag -------------------------------------------------------0
tat -------------------------------------------------2------2
tca -------------------------------------------------------0
tcc --------------------1-----------------------------------1
tcg -------------------------------------------------------0
tct -------------------------------------------------------0
tga -------------------------------------------------------0
tgc ---------------------------------------------------3----3
tgg -------------------------2------------------------------2
tgt --------------------------1-----------------------------1
tta -------------------------------------------------------0
ttc -------------------------------------------------------0
ttg -------------------------------------------------------0
ttt -------------------------------------------------------0
Total 021010001942000000011200002100200000000000000010003000023045000047

-->(%) aaa aac aag aat aca acc acg act aga agc agg agt ata atc atg att caa cac cag cat cca ccc ccg cct cga cgc cgg cgt cta ctc ctg ctt gaa gac gag gat gca gcc gcg gct gga ggc ggg ggt gta gtc gtg gtt taa tac tag tat tca tcc tcg tct tga tgc tgg tgt tta ttc ttg ttt Total
aaa -2.1------------------------------------------------------2.1
aac -------------------------------------------------------0.0
aag -------------------------------------------------------0.0
aat -------4.3------------------------------------------------4.3
aca -------------------------------------------------------0.0
acc -------------------------------------------------------0.0
acg -------------------------------------------------------0.0
act -------------------------------------------------------0.0
aga -------------------------------------------------------0.0
agc -------------------------------------------------------0.0
agg -------------------------------------------------------0.0
agt -------------------------------------------------------0.0
ata -------------------------------------------------------0.0
atc -------------------------------------------------------0.0
atg --2.1-----------------------------------------------------2.1
att -------------------------------------------------------0.0
caa -------------------------------------------------------0.0
cac -------------------------------------------------------0.0
cag ------------------------------------------4.3-------------4.3
cat -------------------------------------------------------0.0
cca -------------------------------------------------------0.0
ccc -------------------------------------------------------0.0
ccg ------------------------4.3-------------------------------4.3
cct -------------------------------------------------------0.0
cga -------------------------------------------------------0.0
cgc -------------------------------------------------------0.0
cgg --------------------------------------------------8.5-----8.5
cgt ---------------------------------------------------10.6----10.6
cta ------------------2.1-------------------------------------2.1
ctc -------------------------------------------------------0.0
ctg -------------------------------------------------------0.0
ctt -------------------------------------------------------0.0
gaa -------------------------------------------------------0.0
gac -4.3------------------------------------------------------4.3
gag ------------------------------------------2.1-------------2.1
gat ------------------2.1-------------------------------------2.1
gca -------------------------------------------------------0.0
gcc --------------------2.1-----------------------------------2.1
gcg ---------------------------------------2.1----------------2.1
gct -------------------------------------------------------0.0
gga --------2.1-----------------------------------------------2.1
ggc ---------19.1----------------------------------------------19.1
ggg ----------8.5---------------------------------------------8.5
ggt -------------------------------------------------------0.0
gta -------------------------------------------------------0.0
gtc -------------------------------------------------------0.0
gtg -------------------------------------------------------0.0
gtt -------------------------------------------------------0.0
taa -------------------------------------------------------0.0
tac -------------------------------------------------------0.0
tag -------------------------------------------------------0.0
tat -------------------------------------------------4.3------4.3
tca -------------------------------------------------------0.0
tcc --------------------2.1-----------------------------------2.1
tcg -------------------------------------------------------0.0
tct -------------------------------------------------------0.0
tga -------------------------------------------------------0.0
tgc ---------------------------------------------------6.4----6.4
tgg -------------------------4.3------------------------------4.3
tgt --------------------------2.1-----------------------------2.1
tta -------------------------------------------------------0.0
ttc -------------------------------------------------------0.0
ttg -------------------------------------------------------0.0
ttt -------------------------------------------------------0.0
Total 0.04.32.10.02.10.00.00.02.119.18.54.30.00.00.00.00.00.00.02.12.14.30.00.00.00.04.32.10.00.04.30.00.00.00.00.00.00.00.00.00.00.00.00.00.00.02.10.00.00.06.40.00.00.00.04.36.40.08.510.60.00.00.00.0100.0