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 - databases for immunodeficiency-causing variations

   FOXP3base
   Variation registry for  Immunodysregulation, polyendocrinopathy, and enteropathy, X-linked; IPEX


Codon changes - FOXP3base

  a
a
a		 a
a
c		 a
a
g		 a
a
t		 a
c
a		 a
c
c		 a
c
g		 a
c
t		 a
g
a		 a
g
c		 a
g
g		 a
g
t		 a
t
a		 a
t
c		 a
t
g		 a
t
t		 c
a
a		 c
a
c		 c
a
g		 c
a
t		 c
c
a		 c
c
c		 c
c
g		 c
c
t		 c
g
a		 c
g
c		 c
g
g		 c
g
t		 c
t
a		 c
t
c		 c
t
g		 c
t
t		 g
a
a		 g
a
c		 g
a
g		 g
a
t		 g
c
a		 g
c
c		 g
c
g		 g
c
t		 g
g
a		 g
g
c		 g
g
g		 g
g
t		 g
t
a		 g
t
c		 g
t
g		 g
t
t		 t
a
a		 t
a
c		 t
a
g		 t
a
t		 t
c
a		 t
c
c		 t
c
g		 t
c
t		 t
g
a		 t
g
c		 t
g
g		 t
g
t		 t
t
a		 t
t
c		 t
t
g		 t
t
t		 Total
aaa                                                                 0
aac                                                                 0
aag                                                                 0
aat                                                                 0
aca                                                                 0
acc              1                                                  1
acg                                                                 0
act                                                                 0
aga                                                                 0
agc                                                                 2
agg                                                                 0
agt                                                                 0
ata                                                                 0
atc                                              1                  1
atg       1     1                                                   2
att                                                                 0
caa                                                                 0
cac                                                                 0
cag                                                                 0
cat                                                                 0
cca                                                                 0
ccc                              1                                  1
ccg                                                                 0
cct                                        1                        1
cga                 1                                               1
cgc                  3                                              3
cgg                                                           1     1
cgt                                                                 0
cta                                                                 0
ctc                                                                 0
ctg                       1                                         1
ctt                                                                 0
gaa                                                                 0
gac                                                                 0
gag                                                                 0
gat                                                                 0
gca                                                                 0
gcc      8                                                          8
gcg                                                                 0
gct                                                                 0
gga                                                                 0
ggc                                                                 0
ggg                                                                 0
ggt                                                                 0
gta                                                                 0
gtc                                                                 0
gtg               3                                                 3
gtt                                                                 0
taa                                                                 0
tac                                                                 0
tag                                                                 0
tat                                                                 0
tca                                                                 0
tcc                                                                 0
tcg                                                                 0
tct                                                                 0
tga                                                                 0
tgc                                                                 0
tgg                                                                 0
tgt                                                                 0
tta                                                                 0
ttc                              3               1           2    1 8
ttg                                                                 0
ttt                                                            1    1
Total 000008100002113013000010000004000000010100000200000000000211001034

-->(%) a
a
a		 a
a
c		 a
a
g		 a
a
t		 a
c
a		 a
c
c		 a
c
g		 a
c
t		 a
g
a		 a
g
c		 a
g
g		 a
g
t		 a
t
a		 a
t
c		 a
t
g		 a
t
t		 c
a
a		 c
a
c		 c
a
g		 c
a
t		 c
c
a		 c
c
c		 c
c
g		 c
c
t		 c
g
a		 c
g
c		 c
g
g		 c
g
t		 c
t
a		 c
t
c		 c
t
g		 c
t
t		 g
a
a		 g
a
c		 g
a
g		 g
a
t		 g
c
a		 g
c
c		 g
c
g		 g
c
t		 g
g
a		 g
g
c		 g
g
g		 g
g
t		 g
t
a		 g
t
c		 g
t
g		 g
t
t		 t
a
a		 t
a
c		 t
a
g		 t
a
t		 t
c
a		 t
c
c		 t
c
g		 t
c
t		 t
g
a		 t
g
c		 t
g
g		 t
g
t		 t
t
a		 t
t
c		 t
t
g		 t
t
t		 Total
aaa                                                                 0
aac                                                                 0
aag                                                                 0
aat                                                                 0
aca                                                                 0
acc              3                                                  3
acg                                                                 0
act                                                                 0
aga                                                                 0
agc                                                                 6
agg                                                                 0
agt                                                                 0
ata                                                                 0
atc                                              3                  3
atg       3     3                                                   6
att                                                                 0
caa                                                                 0
cac                                                                 0
cag                                                                 0
cat                                                                 0
cca                                                                 0
ccc                              3                                  3
ccg                                                                 0
cct                                        3                        3
cga                 3                                               3
cgc                  9                                              9
cgg                                                           3     3
cgt                                                                 0
cta                                                                 0
ctc                                                                 0
ctg                       3                                         3
ctt                                                                 0
gaa                                                                 0
gac                                                                 0
gag                                                                 0
gat                                                                 0
gca                                                                 0
gcc      24                                                          24
gcg                                                                 0
gct                                                                 0
gga                                                                 0
ggc                                                                 0
ggg                                                                 0
ggt                                                                 0
gta                                                                 0
gtc                                                                 0
gtg               9                                                 9
gtt                                                                 0
taa                                                                 0
tac                                                                 0
tag                                                                 0
tat                                                                 0
tca                                                                 0
tcc                                                                 0
tcg                                                                 0
tct                                                                 0
tga                                                                 0
tgc                                                                 0
tgg                                                                 0
tgt                                                                 0
tta                                                                 0
ttc                              9               3           6    3 24
ttg                                                                 0
ttt                                                            3    3
Total 000002430000633903900003000000120000000303000006000000000006330030100
    indicates codon change that require more complex mutation than single nucleotide substitution.
    indicates codon change that single nucleotide doesn't change amino acid (silent mutation).


This site is updated by Gerard Schaafsma
© Protein Structure and Bioinformatics, Lund University, 2017
Last modified 02.03.2025