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 - databases for immunodeficiency-causing variations

   NPbase
   Variation registry for  PNP deficiency


Codon changes - NPbase

  a
a
a		 a
a
c		 a
a
g		 a
a
t		 a
c
a		 a
c
c		 a
c
g		 a
c
t		 a
g
a		 a
g
c		 a
g
g		 a
g
t		 a
t
a		 a
t
c		 a
t
g		 a
t
t		 c
a
a		 c
a
c		 c
a
g		 c
a
t		 c
c
a		 c
c
c		 c
c
g		 c
c
t		 c
g
a		 c
g
c		 c
g
g		 c
g
t		 c
t
a		 c
t
c		 c
t
g		 c
t
t		 g
a
a		 g
a
c		 g
a
g		 g
a
t		 g
c
a		 g
c
c		 g
c
g		 g
c
t		 g
g
a		 g
g
c		 g
g
g		 g
g
t		 g
t
a		 g
t
c		 g
t
g		 g
t
t		 t
a
a		 t
a
c		 t
a
g		 t
a
t		 t
c
a		 t
c
c		 t
c
g		 t
c
t		 t
g
a		 t
g
c		 t
g
g		 t
g
t		 t
t
a		 t
t
c		 t
t
g		 t
t
t		 Total
aaa                                                                 0
aac                                                                 0
aag                                                                 0
aat                                                                 0
aca                                                                 0
acc                                                                 0
acg                                                                 0
act                                                                 0
aga                                                                 0
agc                                                                 0
agg                                                                 0
agt                                                                 0
ata                                                                 0
atc                                                                 0
atg                                                                 0
att                                                                 0
caa                                                                 0
cac                                                                 0
cag                                                                 0
cat                                    1                            1
cca                                                                 0
ccc                                                                 0
ccg                                                                 0
cct                                                                 0
cga                     4                                   4       8
cgc                                                                 0
cgg                                                                 0
cgt                                                                 0
cta                                                                 0
ctc                                                                 0
ctg                                                                 0
ctt                                                                 0
gaa 3                                                               3
gac                                                                 0
gag                                                                 0
gat                                            1                    1
gca     2                                                           2
gcc                                                                 0
gcg                                                                 0
gct                        1                                        1
gga                                     2                           2
ggc                                              2                  2
ggg                                   2                             2
ggt                                                                 0
gta                                                                 0
gtc                                                                 0
gtg                                                                 0
gtt                                                                 0
taa                                                                 0
tac                                                                 0
tag                                                                 0
tat                                                            1    1
tca                                                                 0
tcc                                                                 0
tcg                                                                 0
tct                        2                                        2
tga                                                                 0
tgc                                                                 0
tgg                                                                 0
tgt                                                                 0
tta                                                                 0
ttc                                              2                  2
ttg                                                                 0
ttt                                                                 0
Total 300020000000000000004003000000000021200000010400000000004001000027

-->(%) a
a
a		 a
a
c		 a
a
g		 a
a
t		 a
c
a		 a
c
c		 a
c
g		 a
c
t		 a
g
a		 a
g
c		 a
g
g		 a
g
t		 a
t
a		 a
t
c		 a
t
g		 a
t
t		 c
a
a		 c
a
c		 c
a
g		 c
a
t		 c
c
a		 c
c
c		 c
c
g		 c
c
t		 c
g
a		 c
g
c		 c
g
g		 c
g
t		 c
t
a		 c
t
c		 c
t
g		 c
t
t		 g
a
a		 g
a
c		 g
a
g		 g
a
t		 g
c
a		 g
c
c		 g
c
g		 g
c
t		 g
g
a		 g
g
c		 g
g
g		 g
g
t		 g
t
a		 g
t
c		 g
t
g		 g
t
t		 t
a
a		 t
a
c		 t
a
g		 t
a
t		 t
c
a		 t
c
c		 t
c
g		 t
c
t		 t
g
a		 t
g
c		 t
g
g		 t
g
t		 t
t
a		 t
t
c		 t
t
g		 t
t
t		 Total
aaa                                                                 0
aac                                                                 0
aag                                                                 0
aat                                                                 0
aca                                                                 0
acc                                                                 0
acg                                                                 0
act                                                                 0
aga                                                                 0
agc                                                                 0
agg                                                                 0
agt                                                                 0
ata                                                                 0
atc                                                                 0
atg                                                                 0
att                                                                 0
caa                                                                 0
cac                                                                 0
cag                                                                 0
cat                                    4                            4
cca                                                                 0
ccc                                                                 0
ccg                                                                 0
cct                                                                 0
cga                     15                                   15       30
cgc                                                                 0
cgg                                                                 0
cgt                                                                 0
cta                                                                 0
ctc                                                                 0
ctg                                                                 0
ctt                                                                 0
gaa 11                                                               11
gac                                                                 0
gag                                                                 0
gat                                            4                    4
gca     7                                                           7
gcc                                                                 0
gcg                                                                 0
gct                        4                                        4
gga                                     7                           7
ggc                                              7                  7
ggg                                   7                             7
ggt                                                                 0
gta                                                                 0
gtc                                                                 0
gtg                                                                 0
gtt                                                                 0
taa                                                                 0
tac                                                                 0
tag                                                                 0
tat                                                            4    4
tca                                                                 0
tcc                                                                 0
tcg                                                                 0
tct                        7                                        7
tga                                                                 0
tgc                                                                 0
tgg                                                                 0
tgt                                                                 0
tta                                                                 0
ttc                                              7                  7
ttg                                                                 0
ttt                                                                 0
Total 110007000000000000000150011000000000074700000040150000000000150040000100
    indicates codon change that require more complex mutation than single nucleotide substitution.
    indicates codon change that single nucleotide doesn't change amino acid (silent mutation).


This site is updated by Gerard Schaafsma
© Protein Structure and Bioinformatics, Lund University, 2017
Last modified 02.03.2025