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 - databases for immunodeficiency-causing variations

   ELA2base
   Variation registry for  Cyclic neutropenia; Congenital neutropenia


Codon changes - ELA2base

  a
a
a		 a
a
c		 a
a
g		 a
a
t		 a
c
a		 a
c
c		 a
c
g		 a
c
t		 a
g
a		 a
g
c		 a
g
g		 a
g
t		 a
t
a		 a
t
c		 a
t
g		 a
t
t		 c
a
a		 c
a
c		 c
a
g		 c
a
t		 c
c
a		 c
c
c		 c
c
g		 c
c
t		 c
g
a		 c
g
c		 c
g
g		 c
g
t		 c
t
a		 c
t
c		 c
t
g		 c
t
t		 g
a
a		 g
a
c		 g
a
g		 g
a
t		 g
c
a		 g
c
c		 g
c
g		 g
c
t		 g
g
a		 g
g
c		 g
g
g		 g
g
t		 g
t
a		 g
t
c		 g
t
g		 g
t
t		 t
a
a		 t
a
c		 t
a
g		 t
a
t		 t
c
a		 t
c
c		 t
c
g		 t
c
t		 t
g
a		 t
g
c		 t
g
g		 t
g
t		 t
t
a		 t
t
c		 t
t
g		 t
t
t		 Total
aaa                                                                 0
aac                                                                 0
aag                                                                 0
aat                                                                 0
aca                                                                 0
acc                                                                 0
acg                                                                 0
act                                                                 0
aga                                                                 0
agc                                                                 0
agg                                                                 0
agt                                                                 0
ata                                                                 0
atc                                                                 0
atg                                               1                 1
att        1      1                                                 2
caa                                                                 0
cac                              1                                  1
cag                                                                 0
cat                                                                 0
cca                                                                 0
ccc                          1   2                                  3
ccg                               8                                 8
cct                                                                 0
cga                                                                 0
cgc                                                                 0
cgg                   22   2                                         24
cgt                                                                 0
cta                                                                 0
ctc                  1   1                                          2
ctg                       3                                         3
ctt                                                                 0
gaa                                                                 0
gac                                                                 0
gag                                                                 0
gat                                                                 0
gca                                                                 0
gcc      3               2           1           1                  7
gcg                                               11                 11
gct                                                                 0
gga         5                       2                       1       8
ggc                                  1                              1
ggg                                               1                 1
ggt                                                                 0
gta                                                                 0
gtc              1                   1                              2
gtg               4                                                 4
gtt                                                                 0
taa                                                                 0
tac                                                 1               1
tag                                                                 0
tat                                                                 0
tca                                                 1               1
tcc                                                              1  1
tcg                                                               10 10
tct                                                                 0
tga                                                                 0
tgc          2               1                       3      3       9
tgg                                                                 0
tgt                                                                 0
tta                                                                 0
ttc                                                             1   1
ttg                                                                1010
ttt                                                                 0
Total 00000301520001500122003500200038023000000000001130230000004000111010111

-->(%) a
a
a		 a
a
c		 a
a
g		 a
a
t		 a
c
a		 a
c
c		 a
c
g		 a
c
t		 a
g
a		 a
g
c		 a
g
g		 a
g
t		 a
t
a		 a
t
c		 a
t
g		 a
t
t		 c
a
a		 c
a
c		 c
a
g		 c
a
t		 c
c
a		 c
c
c		 c
c
g		 c
c
t		 c
g
a		 c
g
c		 c
g
g		 c
g
t		 c
t
a		 c
t
c		 c
t
g		 c
t
t		 g
a
a		 g
a
c		 g
a
g		 g
a
t		 g
c
a		 g
c
c		 g
c
g		 g
c
t		 g
g
a		 g
g
c		 g
g
g		 g
g
t		 g
t
a		 g
t
c		 g
t
g		 g
t
t		 t
a
a		 t
a
c		 t
a
g		 t
a
t		 t
c
a		 t
c
c		 t
c
g		 t
c
t		 t
g
a		 t
g
c		 t
g
g		 t
g
t		 t
t
a		 t
t
c		 t
t
g		 t
t
t		 Total
aaa                                                                 0
aac                                                                 0
aag                                                                 0
aat                                                                 0
aca                                                                 0
acc                                                                 0
acg                                                                 0
act                                                                 0
aga                                                                 0
agc                                                                 0
agg                                                                 0
agt                                                                 0
ata                                                                 0
atc                                                                 0
atg                                               1                 1
att        1      1                                                 2
caa                                                                 0
cac                              1                                  1
cag                                                                 0
cat                                                                 0
cca                                                                 0
ccc                          1   2                                  3
ccg                               7                                 7
cct                                                                 0
cga                                                                 0
cgc                                                                 0
cgg                   20   2                                         22
cgt                                                                 0
cta                                                                 0
ctc                  1   1                                          2
ctg                       3                                         3
ctt                                                                 0
gaa                                                                 0
gac                                                                 0
gag                                                                 0
gat                                                                 0
gca                                                                 0
gcc      3               2           1           1                  6
gcg                                               10                 10
gct                                                                 0
gga         5                       2                       1       7
ggc                                  1                              1
ggg                                               1                 1
ggt                                                                 0
gta                                                                 0
gtc              1                   1                              2
gtg               4                                                 4
gtt                                                                 0
taa                                                                 0
tac                                                 1               1
tag                                                                 0
tat                                                                 0
tca                                                 1               1
tcc                                                              1  1
tcg                                                               9 9
tct                                                                 0
tga                                                                 0
tgc          2               1                       3      3       8
tgg                                                                 0
tgt                                                                 0
tta                                                                 0
ttc                                                             1   1
ttg                                                                99
ttt                                                                 0
Total 000003015200015001200035002000370230000000000011202300000040001199100
    indicates codon change that require more complex mutation than single nucleotide substitution.
    indicates codon change that single nucleotide doesn't change amino acid (silent mutation).


This site is updated by Gerard Schaafsma
© Protein Structure and Bioinformatics, Lund University, 2017
Last modified 02.03.2025