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- databases for immunodeficiency-causing variations

   CYBBbase
   Variation registry for  X-linked chronic granulomatous disease (XCGD)


Codon changes - CYBBbase

  a
a
a
a
a
c
a
a
g
a
a
t
a
c
a
a
c
c
a
c
g
a
c
t
a
g
a
a
g
c
a
g
g
a
g
t
a
t
a
a
t
c
a
t
g
a
t
t
c
a
a
c
a
c
c
a
g
c
a
t
c
c
a
c
c
c
c
c
g
c
c
t
c
g
a
c
g
c
c
g
g
c
g
t
c
t
a
c
t
c
c
t
g
c
t
t
g
a
a
g
a
c
g
a
g
g
a
t
g
c
a
g
c
c
g
c
g
g
c
t
g
g
a
g
g
c
g
g
g
g
g
t
g
t
a
g
t
c
g
t
g
g
t
t
t
a
a
t
a
c
t
a
g
t
a
t
t
c
a
t
c
c
t
c
g
t
c
t
t
g
a
t
g
c
t
g
g
t
g
t
t
t
a
t
t
c
t
t
g
t
t
t
Total
aaa                                                 5               5
aac   3                                                             3
aag    2      2                                       2             8
aat                                                                 0
aca 1       2   4       2                                           9
acc                      2                                          2
acg                                                                 0
act                        2                                        2
aga                                                         3       3
agc                                                                 0
agg          1    2                           1                     4
agt                                                                 0
ata         1                                                       1
atc                                                                 0
atg   2       8                                   4                 14
att                                                                11
caa                                                 21               21
cac  3              11        4                       9              27
cag                                                   13             13
cat    1            2      4   14   1                   7            29
cca                                                                 0
ccc                  5       1   6                                  12
ccg                                                                 0
cct                    13       3   6                                22
cga                     1       1                           224       226
cgc                      1                                          1
cgg                                                                 0
cgt                                                                 0
cta                     2                                           2
ctc                      4   4                                      8
ctg                   4   6   4                                     14
ctt                            1                                    1
gaa 1                                           2   9               12
gac                                                                 0
gag   14                                               14             33
gat    3               2              1        1       3            10
gca                                 2           2                   4
gcc                                  4                              5
gcg                                                                 52
gct        3                                   1                    4
gga         4               1       7                       5       18
ggc                                                                 0
ggg           8               4       3   2       2                 19
ggt                                                                 0
gta                                                                 0
gtc                                                                 0
gtg                                           1                     1
gtt                                    1                            1
taa                                                                 0
tac                                  2              8 4             14
tag                                                                 0
tat                                                 6 1             7
tca                     1                           3       2       6
tcc                      6                           1           6  13
tcg                                                                 0
tct                        2                                        3
tga                                                                 0
tgc                          10                       1      12 2  1  26
tgg           2               8                       23     461 2    82
tgt            1               5               1       3   11       12
tta                                                                 0
ttc                                                                 0
ttg                                                       1         1
ttt                1                                                1
Total 4319600037120140211354156136811916231607964150022002340605211571300113001221701752

-->(%) a
a
a
a
a
c
a
a
g
a
a
t
a
c
a
a
c
c
a
c
g
a
c
t
a
g
a
a
g
c
a
g
g
a
g
t
a
t
a
a
t
c
a
t
g
a
t
t
c
a
a
c
a
c
c
a
g
c
a
t
c
c
a
c
c
c
c
c
g
c
c
t
c
g
a
c
g
c
c
g
g
c
g
t
c
t
a
c
t
c
c
t
g
c
t
t
g
a
a
g
a
c
g
a
g
g
a
t
g
c
a
g
c
c
g
c
g
g
c
t
g
g
a
g
g
c
g
g
g
g
g
t
g
t
a
g
t
c
g
t
g
g
t
t
t
a
a
t
a
c
t
a
g
t
a
t
t
c
a
t
c
c
t
c
g
t
c
t
t
g
a
t
g
c
t
g
g
t
g
t
t
t
a
t
t
c
t
t
g
t
t
t
Total
aaa                                                 1               1
aac                                                                 0
aag                                                                 1
aat                                                                 0
aca             1                                                   1
acc                                                                 0
acg                                                                 0
act                                                                 0
aga                                                                 0
agc                                                                 0
agg                                                                 1
agt                                                                 0
ata                                                                 0
atc                                                                 0
atg           1                                   1                 2
att                                                                 0
caa                                                 3               3
cac                 1        1                       1              4
cag                                                   2             2
cat                        1   2                       1            4
cca                                                                 0
ccc                  1           1                                  2
ccg                                                                 0
cct                    2           1                                3
cga                                                         30       30
cgc                                                                 0
cgg                                                                 0
cgt                                                                 0
cta                                                                 0
ctc                      1   1                                      1
ctg                   1   1   1                                     2
ctt                                                                 0
gaa                                                 1               2
gac                                                                 0
gag   2                                               2             4
gat                                                                 1
gca                                                                 1
gcc                                  1                              1
gcg                                                                 7
gct                                                                 1
gga         1                       1                       1       2
ggc                                                                 0
ggg           1               1                                     3
ggt                                                                 0
gta                                                                 0
gtc                                                                 0
gtg                                                                 0
gtt                                                                 0
taa                                                                 0
tac                                                 1 1             2
tag                                                                 0
tat                                                 1               1
tca                                                                 1
tcc                      1                                       1  2
tcg                                                                 0
tct                                                                 0
tga                                                                 0
tgc                          1                              2       3
tgg                           1                       3     6       11
tgt                            1                                    2
tta                                                                 0
ttc                                                                 0
ttg                                                                 0
ttt                                                                 0
Total 10310000103010002112121103230101111070000000101071820000400000100100
    indicates codon change that require more complex mutation than single nucleotide substitution.
    indicates codon change that single nucleotide doesn't change amino acid (silent mutation).




This site is updated by Gerard Schaafsma
© Protein Structure and Bioinformatics, Lund University, 2017
Last modified 16.12.2015