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- databases for immunodeficiency-causing variations

   CYBAbase
   Variation registry for  Autosomal recessive p22phox deficiency


Codon changes - CYBAbase

  a
a
a
a
a
c
a
a
g
a
a
t
a
c
a
a
c
c
a
c
g
a
c
t
a
g
a
a
g
c
a
g
g
a
g
t
a
t
a
a
t
c
a
t
g
a
t
t
c
a
a
c
a
c
c
a
g
c
a
t
c
c
a
c
c
c
c
c
g
c
c
t
c
g
a
c
g
c
c
g
g
c
g
t
c
t
a
c
t
c
c
t
g
c
t
t
g
a
a
g
a
c
g
a
g
g
a
t
g
c
a
g
c
c
g
c
g
g
c
t
g
g
a
g
g
c
g
g
g
g
g
t
g
t
a
g
t
c
g
t
g
g
t
t
t
a
a
t
a
c
t
a
g
t
a
t
t
c
a
t
c
c
t
c
g
t
c
t
t
g
a
t
g
c
t
g
g
t
g
t
t
t
a
t
t
c
t
t
g
t
t
t
Total
aaa                                                                 0
aac                                                                 0
aag                                                                 0
aat                                                                 0
aca                                                                 0
acc                                                                 0
acg                                                                 0
act                                                                 0
aga                                                                 0
agc         8                                                       8
agg                                                                 0
agt                                                                 0
ata                                                                 0
atc                                                                 0
atg   2                                                             2
att                                                                 0
caa                                                                 0
cac                                                                 0
cag                                                   6             6
cat                            2                                    2
cca                                                                 0
ccc                          2                                      2
ccg                   2                                             2
cct                                                                 0
cga                                                                 0
cgc                                                                 0
cgg                   7   2                   2               15     26
cgt                                                                 0
cta                                                                 0
ctc                                                                 0
ctg                   1   2                                         9
ctt                                                                 0
gaa                                                                 0
gac                                                                 0
gag                                               1                 1
gat                                                                 0
gca                                                                 0
gcc                                                                 0
gcg                                               1       2         3
gct        2                                                        2
gga                                                                 0
ggc                                              1                  1
ggg           13                       2                             15
ggt                                                                 0
gta                                                                 0
gtc                                                                 0
gtg                                                                 0
gtt                                                                 0
taa                                                                 0
tac                                                 2 2             4
tag                                                                 0
tat                                                                 0
tca                                                                 0
tcc                                                                 0
tcg                                                                 0
tct                                                                 0
tga                                                                 0
tgc                                                         2       2
tgg                                                   2     2       4
tgt                                                                 0
tta                                                                 0
ttc                                                                 0
ttg                                                                 0
ttt                                                                 0
Total 0020000280130000000100004002024002002000000020012020100002040150000089

-->(%) a
a
a
a
a
c
a
a
g
a
a
t
a
c
a
a
c
c
a
c
g
a
c
t
a
g
a
a
g
c
a
g
g
a
g
t
a
t
a
a
t
c
a
t
g
a
t
t
c
a
a
c
a
c
c
a
g
c
a
t
c
c
a
c
c
c
c
c
g
c
c
t
c
g
a
c
g
c
c
g
g
c
g
t
c
t
a
c
t
c
c
t
g
c
t
t
g
a
a
g
a
c
g
a
g
g
a
t
g
c
a
g
c
c
g
c
g
g
c
t
g
g
a
g
g
c
g
g
g
g
g
t
g
t
a
g
t
c
g
t
g
g
t
t
t
a
a
t
a
c
t
a
g
t
a
t
t
c
a
t
c
c
t
c
g
t
c
t
t
g
a
t
g
c
t
g
g
t
g
t
t
t
a
t
t
c
t
t
g
t
t
t
Total
aaa                                                                 0
aac                                                                 0
aag                                                                 0
aat                                                                 0
aca                                                                 0
acc                                                                 0
acg                                                                 0
act                                                                 0
aga                                                                 0
agc         9                                                       9
agg                                                                 0
agt                                                                 0
ata                                                                 0
atc                                                                 0
atg   2                                                             2
att                                                                 0
caa                                                                 0
cac                                                                 0
cag                                                   7             7
cat                            2                                    2
cca                                                                 0
ccc                          2                                      2
ccg                   2                                             2
cct                                                                 0
cga                                                                 0
cgc                                                                 0
cgg                   8   2                   2               17     29
cgt                                                                 0
cta                                                                 0
ctc                                                                 0
ctg                   1   2                                         10
ctt                                                                 0
gaa                                                                 0
gac                                                                 0
gag                                               1                 1
gat                                                                 0
gca                                                                 0
gcc                                                                 0
gcg                                               1       2         3
gct        2                                                        2
gga                                                                 0
ggc                                              1                  1
ggg           15                       2                             17
ggt                                                                 0
gta                                                                 0
gtc                                                                 0
gtg                                                                 0
gtt                                                                 0
taa                                                                 0
tac                                                 2 2             4
tag                                                                 0
tat                                                                 0
tca                                                                 0
tcc                                                                 0
tcg                                                                 0
tct                                                                 0
tga                                                                 0
tgc                                                         2       2
tgg                                                   2     2       4
tgt                                                                 0
tta                                                                 0
ttc                                                                 0
ttg                                                                 0
ttt                                                                 0
Total 00200002901500000001100040020240020020000000200120201100020401700000100
    indicates codon change that require more complex mutation than single nucleotide substitution.
    indicates codon change that single nucleotide doesn't change amino acid (silent mutation).




This site is updated by Gerard Schaafsma
© Protein Structure and Bioinformatics, Lund University, 2017
Last modified 23.10.2015